Publications

Graziosi, A.; Corrieri, C.; Sita, G.; Ghelli, L.; Angelini, S.; di Villa Bianca, R. d.; Mitidieri, E.; Sorrentino, R.; Hrelia, P.; Morroni, F., Impact of 17-alpha ethinyl estradiol (EE2) and diethyl phthalate (DEP) exposure on microRNAs expression and their target genes in differentiated SH-SY5Y cells, «SCIENTIFIC REPORTS», 2025, 15, pp. 1 - 15 [Scientific article]

Mezzetti, A.; Malferrari, M.; Venturoli, G.; Francia, F.; Leibl, W.; Noda, I., Rapid-Scan Fourier Transform Infrared Difference Spectroscopy with Two-Dimensional Correlation Analysis to Show the Build-Up of Light-Adapted States in Bacterial Photosynthetic Reaction Centers, «APPLIED SPECTROSCOPY», 2025, 0, pp. 1 - 11 [Scientific article]

Romeo, E.; Saccoliti, F.; Ocello, R.; Andonaia, A.; Allegretta, C.; Pastorino, C.; Pedemonte, N.; Falchi, F.; Laselva, O.; Bandiera, T.; Bertozzi, F., Target Identification with Live-Cell Photoaffinity Labeling and Mechanism of Action Elucidation of ARN23765, a Highly Potent CFTR Corrector, «JOURNAL OF MEDICINAL CHEMISTRY», 2025, 68, pp. 4596 - 4618 [Scientific article]

Pietrantonio, Laura; Devers-Lamrani, Marion; Thorpe, Peter; Arnton, Catherine; Robertson-Albertyn, Senga; Savojardo, Castrense; Hartmann, Alain; Martin-Laurent, Fabrice; Abbott, James; Bulgarelli, Davide, A genome-annotated bacterial collection of the plant food system microbiota, «MICROBIOLOGY RESOURCE ANNOUNCEMENTS», 2025, 14, pp. 1 - 6 [Scientific article]

Savojardo, Castrense; Manfredi, Matteo; Martelli, Pier Luigi; Casadio, Rita, DDGemb: predicting protein stability change upon single- and multi-point variations with embeddings and deep learning, «BIOINFORMATICS», 2025, 41, pp. 1 - 7 [Scientific article]

Manfredi, Matteo; Vazzana, Gabriele; Savojardo, Castrense; Martelli, Pier Luigi; Casadio, Rita, AlphaFold2 and ESMFold: A large-scale pairwise model comparison of human enzymes upon Pfam functional annotation, «COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL», 2025, 27, pp. 461 - 466 [Scientific article]

Chen, Yile; Lee, Kyoungyeul; Woo, Junwoo; Kim, Dong-wook; Keum, Changwon; Babbi, Giulia; Casadio, Rita; Martelli, Pier Luigi; Savojardo, Castrense; Manfredi, Matteo; Shen, Yang; Sun, Yuanfei; Katsonis, Panagiotis; Lichtarge, Olivier; Pejaver, Vikas; Seward, David J.; Kamandula, Akash; Bakolitsa, Constantina; Brenner, Steven E.; Radivojac, Predrag; O'Donnell-Luria, Anne; Mooney, Sean D.; Jain, Shantanu, Evaluating predictors of kinase activity of STK11 variants identified in primary human non-small cell lung cancers, «HUMAN GENETICS», 2025, 1, pp. 1 - 16 [Scientific article]

Upton, Dannielle H; Liu, Jie; George, Sandra M; Valvi, Santosh; Ung, Caitlin; Rayner, Benjamin S; Gopalakrishnan, Anjana; Pandher, Ruby; Khan, Aaminah; Venkat, Pooja; Mayoh, Chelsea; Holliday, Holly; Yeung, Nicole; Nguyen, Hieu; Franshaw, Laura; Ehteda, Anahid; Shen, Han; Farruggia, Giovanna; Orienti, Isabella; Reynolds, C Patrick; Tsoli, Maria; Ziegler, David S, High-throughput in vitro drug screening and in vivo studies identify fenretinide as a brain-penetrant DMG therapeutic, «NEURO-ONCOLOGY», 2025, Non conosciuto, pp. N/A - N/A [Scientific article]

Uliassi, E.; Bolognesi, M. L.; Milelli, A., Targeting Tau Protein with Proximity Inducing Modulators: A New Frontier to Combat Tauopathies, «ACS PHARMACOLOGY & TRANSLATIONAL SCIENCE», 2025, 8, pp. 654 - 672 [Scientific article]

Interino, N.; Vitagliano, R.; D'Amico, F.; Lodi, R.; Porru, E.; Turroni, S.; Fiori, J., Microbiota–Gut–Brain Axis: Mass-Spectrometry-Based Metabolomics in the Study of Microbiome Mediators—Stress Relationship, «BIOMOLECULES», 2025, 15, pp. 1 - 28 [Scientific article]

Bovo, S; Ribani, A; Fanelli, F; Galimberti, G; Martelli, Pl; Trevisi, P; Bertolini, F; Bolner, M; Casadio, R; Dall'Olio, S; Gallo, M; Luise, D; Mazzoni, G; Schiavo, G; Taurisano, V; Zambonelli, P; Bosi, P; Pagotto, U; Fontanesi, L, Merging metabolomics and genomics provides a catalog of genetic factors that influence molecular phenotypes in pigs linking relevant metabolic pathways, «GENETICS SELECTION EVOLUTION», 2025, 57, pp. 1 - 27 [Scientific article] Open Access

Mezzetti, Alberto; Malferrari, Marco; Francia, Francesco; Venturoli, Giovanni, Effect of Dehydration on Light-Adapted States of Bacterial Reaction Centers Studied by Time-Resolved Rapid-Scan FTIR Difference Spectroscopy, «SPECTROSCOPY JOURNAL», 2025, 3, pp. 1 - 12 [Scientific article]

Colina, Matteo; Campana, Gabriele, Precision Medicine in Rheumatology: The Role of Biomarkers in Diagnosis and Treatment Optimization, «JOURNAL OF CLINICAL MEDICINE», 2025, 14, pp. 1 - 29 [Scientific article]

Bertoni, S.; Albertini, B.; Passerini, N., Effect of polyoxylglycerides-based excipients (Gelucire®) on ketoprofen amorphous solubility and crystallization from the supersaturated state, «INTERNATIONAL JOURNAL OF PHARMACEUTICS», 2025, 669, pp. 1 - 12 [Scientific article]

Zuffa, Caterina; Veclani, Daniele; Marchini, Marianna; Monti, Filippo; Cappuccino, Chiara; Maini, Lucia; Ventura, Barbara, Rationalization of the structural, electronic and photophysical properties of silver(i) halide n-picolylamine hybrid coordination polymers, «DALTON TRANSACTIONS», 2025, 54, pp. 2799 - 2811 [Scientific article]

Fioresi, R., V.S. Varadarajan (1937–2019): In memoriam, in: Symmetry in Mathematics: An Issue Dedicated to V. S. Varadarajan, Amsterdam, Elsevier, 2025, pp. 1 - 4 [Chapter or essay]

D’Alessandro, Margherita; Gottardi, Davide; Arboleya, Silvia; Monserrat Alvarado-Jasso, Guadalupe; Parolin, Carola; Vitali, Beatrice; Lanciotti, Rosalba; Gueimonde, Miguel; Patrignani, Francesca, Impact of fermented soy beverages containing selected vaginal probiotics on the in vitro fecal microbiota of post-menopausal women, «FOODS», 2025, 14, pp. 1 - 22 [Scientific article] Open Access

Masi, Mirco; Poppi, Laura; Previtali, Viola; Nelson, Shannon R; Wynne, Kieran; Varignani, Giulia; Falchi, Federico; Veronesi, Marina; Albanesi, Ennio; Tedesco, Daniele; De Franco, Francesca; Ciamarone, Andrea; Myers, Samuel H; Ortega, Jose Antonio; Bagnolini, Greta; Ferrandi, Giovanni; Farabegoli, Fulvia; Tirelli, Nicola; Di Stefano, Giuseppina; Oliviero, Giorgio; Walsh, Naomi; Roberti, Marinella; Girotto, Stefania; Cavalli, Andrea, Investigating synthetic lethality and PARP inhibitor resistance in pancreatic cancer through enantiomer differential activity, «CELL DEATH DISCOVERY», 2025, 11, pp. 1 - 23 [Scientific article]

Mehrab, Aneeqa; Lapenna, Michela; Zanchetta, Ferdinando; Simonetti, Angelica; Faglioni, Giovanni; Malagoli, Andrea; Fioresi, Rita, Kolmogorov–Arnold and Long Short-Term Memory Convolutional Network Models for Supervised Quality Recognition of Photoplethysmogram Signals, «ENTROPY», 2025, 27, pp. 1 - 11 [Scientific article]

Berti, Gian Marco; Manaresi, Elisabetta; Vischini, Gisella; Provenzano, Michele; Corradetti, Valeria; Giannella, Maddalena; Bonazzetti, Cecilia; Rinaldi, Matteo; Fabbrizio, Benedetta; Ravaioli, Matteo; Gallinella, Giorgio; La Manna, Gaetano; Comai, Giorgia, Exploring parvovirus B19 pathogenesis and therapy among kidney transplant recipients: case report and review of literature, «THE LANCET INFECTIOUS DISEASES», 2025, 101016, pp. 1 - 9 [Scientific article]